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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
Assay category
7
DNA accessibility
Date released
5
February, 2023
2
February, 2021
Available data
1481
bam
1384
bigWig
830
bed narrowPeak
812
fastq
518
tsv
478
bigBed narrowPeak
160
tagAlign
108
bed broadPeak
108
bigBed broadPeak
67
bed bed3+
10
bed bedMethyl
10
bedpe bed3+
10
bigBed bedMethyl
9
hic
7
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
2
csv
2
ibed
1
vcf
Organism
7
Homo sapiens
Biosample type
5
in vitro differentiated cells
tissue
1
cell line
1
primary cell
Organ
6
connective tissue
1
liver
Project
7
AMP
Genome assembly (visualization)
7
hg19
2
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
1
inconsistent replicate
lab.title!
Klaus Kaestner, Upenn
biosample_type!
tissue
organ_slims!
eye
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
primary cell
osteoblast
1
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