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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
8
single cell RNA-seq
Assay category
67
Transcription
Date released
84
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
Available data
1907
bam
1772
bigWig
1069
tsv
984
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
204
bed bed3+
176
bigBed broadPeak
151
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
5
bed bed3
1
bedpe
1
csv
1
tagAlign bed3+
Organism
151
Homo sapiens
Biosample type
151
tissue
3
in vitro differentiated cells
1
cell line
Organ
88
bone element
57
kidney
6
pancreas
4
skeleton
Project
151
AMP
Lab
88
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
audit script error
lab.title!
Klaus Kaestner, Upenn
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
151 results
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RNA microarray
total RNA-seq
single cell RNA-seq
tissue
bone element
84
kidney
49
8
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
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