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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
284
ChIP-seq
Assay category
284
DNA binding
Target of assay
598
histone modification
597
histone
313
narrow histone mark
284
broad histone mark
158
control
79
transcription factor
17
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
73
August, 2017
56
May, 2019
42
November, 2017
39
October, 2019
37
April, 2019
20
May, 2024
October, 2018
10
October, 2017
4
January, 2019
3
December, 2017
Available data
234
bed narrowPeak
234
bigWig
203
bam
185
bigBed narrowPeak
76
tagAlign
34
fastq
20
bed broadPeak
6
bed bed3+
Organism
280
Homo sapiens
Biosample type
284
tissue
122
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
70
brain
57
heart
36
blood vessel
36
vasculature
34
limb
25
liver
22
pancreas
20
adipose tissue
20
connective tissue
16
musculature of body
16
nerve
14
artery
10
kidney
4
spleen
Project
284
AMP
Genome assembly (visualization)
223
GRCh38
179
hg19
Lab
264
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
lab.title!
Klaus Kaestner, Upenn
month_released!
October, 2018
BIOSAMPLE
ASSAY
284 results
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ChIP-seq
tissue
liver
22
left cardiac atrium
20
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
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