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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
194
total RNA-seq
172
ChIP-seq
139
ATAC-seq
67
single cell RNA-seq
34
snATAC-seq
17
pCHi-C
10
MeRIP-seq
5
Hi-C
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
34
DNA accessibility
Date released
16
January, 2021
10
April, 2020
6
August, 2021
2
February, 2023
Organism
33
Homo sapiens
Biosample type
26
tissue
8
primary cell
Organ
10
lung
10
pancreas
8
blood
8
bodily fluid
6
kidney
Project
18
T1D
10
LungMap
6
AMP
Lab
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
Katalin Susztak, Upenn
AMP-T2D consortium
lab.title!
Klaus Kaestner, Upenn
AMP-T2D consortium
BIOSAMPLE
ASSAY
34 results
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snATAC-seq
tissue
lung
10
islet of Langerhans
6
kidney
6
pancreas
4
primary cell
peripheral blood mononuclear cell
8