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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
141
ChIP-seq
2
total RNA-seq
Assay category
141
DNA binding
2
Transcription
Target of assay
61
histone
61
histone modification
57
transcription factor
50
control
34
broad histone mark
narrow histone mark
15
RNA binding protein
3
chromatin remodeller
Date released
670
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
173
October, 2019
168
July, 2018
129
February, 2023
108
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
66
May, 2022
65
October, 2018
61
March, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
143
bam
133
fastq
93
bigWig
91
bed narrowPeak
77
bigBed narrowPeak
10
bed bed3+
2
tsv
Organism
143
Homo sapiens
Biosample type
109
tissue
30
in vitro differentiated cells
2
primary cell
2
stem cell
Organ
56
liver
42
pancreas
23
adipose tissue
23
connective tissue
14
epithelium
8
embryo
Project
143
AMP
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
143
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
9
inconsistent control read length
lab.title!
Klaus Kaestner, Upenn
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
143 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
38
body of pancreas
28
subcutaneous adipose tissue
12
omental fat pad
11
endocrine pancreas
10
+ See 2 more…
in vitro differentiated cells
hepatocyte
10
pancreatic endoderm
6
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
+ See 1 more…
primary cell
pancreatic acinar cell
2
stem cell
hESC
2
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