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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
ATAC-seq
23
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
23
DNA binding
Target of assay
27
histone
27
histone modification
narrow histone mark
23
control
Date released
648
February, 2021
368
November, 2017
318
August, 2017
301
May, 2021
232
August, 2021
214
May, 2020
207
June, 2019
168
July, 2018
151
October, 2019
102
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
65
October, 2018
57
April, 2019
57
March, 2020
49
April, 2018
47
September, 2023
44
September, 2018
35
December, 2018
31
February, 2018
31
November, 2019
28
May, 2022
27
January, 2019
26
February, 2023
25
February, 2020
25
May, 2024
19
April, 2020
16
January, 2021
15
November, 2020
13
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
3
June, 2018
1
August, 2022
1
March, 2019
1
October, 2022
Available data
211
bam
189
tsv
188
bigWig
23
tagAlign
Organism
214
Homo sapiens
Biosample type
166
tissue
47
primary cell
1
cell line
Organ
167
liver
Project
169
AMP
45
T1D
Genome assembly (visualization)
188
GRCh38
188
hg19
Lab
169
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
lab.title!
Klaus Kaestner, Upenn
target.investigated_as!
narrow histone mark
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
214 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 22 more…
cell line
HepG2
1
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