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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
pCHi-C
3
ChIP-seq
1
ATAC-seq
1
RRBS
Assay category
Transcription
3
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
7
October, 2019
1
July, 2019
1
June, 2019
Available data
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
9
Homo sapiens
Biosample type
7
tissue
2
primary cell
Organ
157
liver
154
pancreas
128
connective tissue
89
bone element
77
adipose tissue
73
epithelium
59
brain
46
kidney
36
heart
36
vasculature
34
blood vessel
27
musculature of body
23
limb
15
blood
15
bodily fluid
11
lung
11
nerve
11
spleen
9
artery
9
embryo
9
eye
9
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
9
AMP
Genome assembly (visualization)
1
hg19
Lab
9
AMP-T2D consortium
lab.title!
Klaus Kaestner, Upenn
assay_slims!
Transcription
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
9 results
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Clear Filters
pCHi-C
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
4
2
1
primary cell
retinal pigment epithelial cell
1
1
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