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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
1
DNase-seq
Assay category
161
DNA binding
133
Transcription
38
DNA accessibility
4
3D chromatin structure
Date released
12
August, 2021
12
February, 2023
5
November, 2019
4
February, 2021
4
October, 2019
1
August, 2017
Available data
22
bed narrowPeak
18
bam
8
bigWig
7
bed bedgraph
5
bed bed3
4
bed bed3+
3
bigBed narrowPeak
3
txt
1
bed broadPeak
1
bigBed broadPeak
1
fastq
Organism
38
Homo sapiens
Biosample type
431
tissue
280
primary cell
38
in vitro differentiated cells
31
cell line
Organ
18
connective tissue
Project
38
AMP
Genome assembly (visualization)
38
hg19
18
GRCh38
Lab
33
AMP-T2D consortium
Kyle Gaulton, UCSD
5
Struan F.A. Grant, CHOP
Audit category:
10
inconsistent ontology term
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
38 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
neural progenitor cell
10
adipocyte
8
1
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
chondrocyte
5
immature adipocyte
2
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