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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
ChIP-seq
Assay category
92
DNA binding
Target of assay
92
histone
92
histone modification
46
broad histone mark
45
narrow histone mark
37
transcription factor
32
control
6
RNA binding protein
3
chromatin remodeller
Date released
37
August, 2017
24
December, 2017
16
February, 2018
14
August, 2021
1
May, 2021
Available data
79
bam
78
bed narrowPeak
78
bigWig
65
fastq
26
tagAlign
12
bigBed narrowPeak
8
bed bed3+
Organism
92
Homo sapiens
Biosample type
627
tissue
123
primary cell
92
in vitro differentiated cells
38
cell line
2
stem cell
Organ
37
connective tissue
15
epithelium
12
embryo
12
liver
1
pancreas
Project
92
AMP
Genome assembly (visualization)
78
GRCh38
77
hg19
Lab
92
AMP-T2D consortium
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
7
inconsistent control read length
lab.title!
Kyle Gaulton, UCSD
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
92 results
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ChIP-seq
in vitro differentiated cells
adipocyte
37
neural progenitor cell
14
hepatocyte
12
pancreatic endoderm
10
definitive endodermal cell
4
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