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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
2
total RNA-seq
Assay category
8
DNA binding
2
Transcription
Target of assay
4
control
3
histone
3
histone modification
3
narrow histone mark
1
transcription factor
Date released
5
December, 2017
5
May, 2021
Available data
24
bam
20
bigWig
19
fastq
18
bed narrowPeak
bigBed narrowPeak
3
tagAlign
2
tsv
Organism
10
Homo sapiens
Biosample type
345
primary cell
78
cell line
15
tissue
10
in vitro differentiated cells
Organ
94
connective tissue
29
embryo
10
epithelium
3
pancreas
1
adipose tissue
1
heart
1
liver
Project
10
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
10
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
1
inconsistent control read length
lab.title!
Kyle Gaulton, UCSD
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
Hepatic endoderm
4
pancreatic PP cell
3
endothelial cell
1
hepatocyte
1
intermediate endothelial cell
1
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