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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
66
histone
66
histone modification
33
narrow histone mark
33
transcription factor
32
broad histone mark
22
control
6
RNA binding protein
3
chromatin remodeller
Date released
12
August, 2017
11
December, 2017
8
February, 2018
1
August, 2021
Available data
37
bam
37
bed narrowPeak
37
bigWig
31
fastq
tagAlign
7
bigBed narrowPeak
4
bed bed3+
Organism
32
Homo sapiens
Biosample type
227
tissue
51
primary cell
32
in vitro differentiated cells
13
cell line
1
stem cell
Organ
12
connective tissue
7
epithelium
7
liver
4
embryo
Project
32
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
32
AMP-T2D consortium
Kyle Gaulton, UCSD
Audit category:
5
inconsistent control read length
lab.title!
Kyle Gaulton, UCSD
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
in vitro differentiated cells
adipocyte
12
hepatocyte
7
pancreatic endoderm
4
definitive endodermal cell
2
primitive gut cell
2
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