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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
Assay category
22
DNA binding
Target of assay
12
histone
12
histone modification
10
transcription factor
7
narrow histone mark
5
broad histone mark
2
chromatin remodeller
Date released
11
August, 2017
9
December, 2017
2
February, 2018
Available data
22
bam
22
bed narrowPeak
22
bigWig
22
fastq
8
bed bed3+
1
bigBed narrowPeak
Organism
22
Homo sapiens
Biosample type
26
cell line
17
in vitro differentiated cells
6
tissue
5
primary cell
2
stem cell
Organ
6
connective tissue
5
epithelium
4
pancreas
3
embryo
Project
22
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
Lab
22
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
22
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
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primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
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