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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
3
single cell RNA-seq
Assay category
29
DNA binding
3
Transcription
Target of assay
119
histone
119
histone modification
63
narrow histone mark
56
broad histone mark
32
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
13
August, 2017
8
June, 2019
3
July, 2019
3
November, 2017
3
October, 2019
1
August, 2021
1
May, 2019
Available data
32
bam
16
fastq
7
bigWig
3
tsv
2
tagAlign
Organism
32
Homo sapiens
Biosample type
167
tissue
76
cell line
32
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
21
epithelium
12
pancreas
6
brain
4
vasculature
3
blood vessel
3
connective tissue
3
kidney
2
heart
2
musculature of body
2
vein
1
eye
1
liver
Project
32
AMP
Genome assembly (visualization)
7
hg19
3
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
cardiac fibroblast
2
cerebellar granule cell
2
endothelial cell of umbilical vein
2
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