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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
200
ATAC-seq
187
single cell RNA-seq
147
total RNA-seq
139
ChIP-seq
48
snATAC-seq
47
WGBS
25
DNase-seq
9
RRBS
6
Hi-C
2
small RNA-seq
1
DNAme array
1
pCHi-C
Assay category
147
Transcription
Date released
76
February, 2023
26
September, 2018
16
September, 2020
11
July, 2019
5
December, 2019
4
November, 2020
2
May, 2020
2
May, 2021
2
October, 2018
2
October, 2019
1
February, 2021
Available data
120
fastq
52
bam
52
bigWig
52
tsv
Organism
147
Homo sapiens
Biosample type
1018
tissue
147
primary cell
131
in vitro differentiated cells
61
cell line
Organ
93
epithelium
81
pancreas
10
connective tissue
6
kidney
5
liver
4
heart
2
artery
2
blood vessel
vasculature
1
adipose tissue
1
musculature of body
1
pericardium
Project
92
HPAP
55
AMP
Genome assembly (visualization)
52
GRCh38
52
hg19
Lab
Kyle Gaulton, UCSD
92
Klaus Kaestner, Upenn
55
AMP-T2D consortium
lab.title!
Kyle Gaulton, UCSD
organ_slims!
vasculature
BIOSAMPLE
ASSAY
147 results
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total RNA-seq
primary cell
pancreatic alpha cell
52
exocrine cell
39
pancreatic beta cell
21
hepatocyte
5
osteoblast
5
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