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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
147
ChIP-seq
Assay category
147
DNA binding
Target of assay
147
histone
147
histone modification
74
narrow histone mark
73
broad histone mark
29
control
12
transcription factor
5
nucleotide modification
1
RNA binding protein
Date released
96
August, 2017
23
October, 2019
13
November, 2017
6
October, 2017
4
August, 2021
4
May, 2021
1
April, 2019
Available data
719
bigWig
701
bed narrowPeak
bam
391
bigBed narrowPeak
237
tagAlign
229
fastq
65
bed broadPeak
30
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
147
Homo sapiens
Biosample type
127
tissue
13
in vitro differentiated cells
4
primary cell
3
cell line
Organ
44
connective tissue
31
adipose tissue
23
liver
21
brain
19
musculature of body
14
pancreas
4
gonad
4
ovary
2
eye
1
heart
1
limb
1
lymph node
Project
147
AMP
Genome assembly (visualization)
27
hg19
2
GRCh38
Lab
144
AMP-T2D consortium
Kyle Gaulton, UCSD
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
lab.title!
Kyle Gaulton, UCSD
files.file_type!
bam
BIOSAMPLE
ASSAY
147 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
35
subcutaneous abdominal adipose tissue
31
liver
20
skeletal muscle tissue
19
brain
6
+ See 8 more…
in vitro differentiated cells
adipocyte
12
neural progenitor cell
1
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
2
monocyte
1
neutrophil
1
cell line
HepG2
3
See all biosamples
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