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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
1
ATAC-seq
Assay category
20
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
8
November, 2018
7
December, 2018
7
January, 2019
March, 2020
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
23
Homo sapiens
Biosample type
23
tissue
Organ
852
pancreas
775
liver
654
connective tissue
497
epithelium
484
adipose tissue
356
heart
274
kidney
249
brain
219
vasculature
215
blood vessel
158
bone element
137
artery
86
limb
61
blood
61
bodily fluid
57
eye
57
musculature of body
41
nerve
34
embryo
23
spleen
19
lung
19
vein
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
23
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
23
AMP-T2D consortium
lab.title!
Kyle Gaulton, UCSD
files.file_type!
bed bed3+
month_released!
March, 2020
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
WGBS
ATAC-seq
tissue
spleen
20
2
1
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