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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
Assay category
20
DNA binding
Target of assay
653
histone
653
histone modification
344
narrow histone mark
309
broad histone mark
167
control
48
transcription factor
20
RNA binding protein
7
recombinant protein
5
nucleotide modification
Date released
5
May, 2019
5
May, 2024
4
April, 2019
4
June, 2019
1
August, 2021
1
November, 2019
Available data
106
bigWig
105
bed narrowPeak
103
bam
93
bigBed narrowPeak
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
20
Homo sapiens
Biosample type
13
tissue
5
primary cell
2
cell line
Organ
11
heart
4
epithelium
3
blood vessel
3
kidney
3
vasculature
1
artery
1
connective tissue
1
eye
1
liver
1
pancreas
Project
20
AMP
Genome assembly (visualization)
18
GRCh38
14
hg19
Lab
14
AMP-T2D consortium
Kyle Gaulton, UCSD
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
lab.title!
Kyle Gaulton, UCSD
files.file_type!
fastq
ibed
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
tissue
left cardiac atrium
5
heart left ventricle
3
ascending aorta
1
coronary artery
1
kidney
1
+ See 2 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
retinal pigment epithelial cell
1
cell line
EndoC_BH1
1
HepG2
1
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