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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
59
ATAC-seq
41
WGBS
34
single cell RNA-seq
22
snATAC-seq
20
total RNA-seq
Assay category
81
DNA accessibility
80
DNA binding
54
Transcription
41
DNA methylation
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
14
control
6
transcription factor
4
RNA binding protein
Date released
February, 2021
411
August, 2017
406
November, 2017
319
August, 2021
314
October, 2019
296
May, 2020
218
June, 2019
182
February, 2023
176
May, 2022
168
July, 2018
164
May, 2021
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
134
zippedFastqFolder
85
bed narrowPeak
85
bigWig
79
bam
64
bigBed narrowPeak
1
bed bed3+
1
txt
Organism
256
Homo sapiens
Biosample type
134
primary cell
122
tissue
Organ
80
epithelium
80
pancreas
57
heart
40
liver
23
kidney
2
musculature of body
Project
134
HPAP
122
AMP
Genome assembly (visualization)
86
hg19
64
GRCh38
Lab
134
Klaus Kaestner, Upenn
82
AMP-T2D consortium
40
Karen Mohlke, UNC
Kyle Gaulton, UCSD
Audit category:
1
audit script error
lab.title!
Kyle Gaulton, UCSD
month_released!
February, 2021
BIOSAMPLE
ASSAY
256 results
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Clear Filters
ChIP-seq
ATAC-seq
WGBS
single cell RNA-seq
snATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
liver
20
20
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
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