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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
total RNA-seq
32
pCHi-C
18
Hi-C
18
small RNA-seq
15
RRBS
12
WGBS
10
ATAC-seq
3
ChIP-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
10
DNA accessibility
Date released
100
May, 2020
92
February, 2023
76
August, 2021
59
May, 2022
29
May, 2021
26
November, 2019
22
February, 2021
22
October, 2019
14
September, 2018
11
May, 2023
8
October, 2017
7
August, 2020
6
July, 2019
5
August, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
1
November, 2020
Available data
10
bigWig
6
bam
5
bed narrowPeak
2
tsv
Organism
10
Homo sapiens
Biosample type
8
tissue
2
cell line
Organ
4
heart
4
pancreas
2
blood vessel
2
epithelium
2
vasculature
1
artery
1
brain
Project
10
AMP
Genome assembly (visualization)
9
hg19
6
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
10 results
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ATAC-seq
tissue
heart left ventricle
2
islet of Langerhans
2
coronary artery
1
posterior cingulate cortex
1
right atrium auricular region
1
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cell line
EndoC_BH1
2
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