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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
378
ChIP-seq
Assay category
378
DNA binding
Target of assay
243
transcription factor
116
histone
116
histone modification
68
broad histone mark
65
recombinant protein
48
narrow histone mark
39
RNA binding protein
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
574
February, 2021
281
November, 2017
276
August, 2017
217
October, 2019
215
May, 2020
187
June, 2019
164
July, 2018
141
May, 2021
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
21
May, 2022
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
378
bigWig
377
bam
356
bed narrowPeak
355
bigBed narrowPeak
275
fastq
70
bed broadPeak
64
bigBed broadPeak
18
tagAlign
3
tar
Organism
378
Homo sapiens
Biosample type
266
cell line
99
tissue
13
primary cell
Organ
266
liver
45
vasculature
42
blood vessel
40
brain
15
heart
10
epithelium
6
limb
6
musculature of body
4
kidney
3
artery
1
pancreas
Project
378
AMP
Genome assembly (visualization)
378
hg19
376
GRCh38
Lab
378
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
378 results
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Clear Filters
ChIP-seq
cell line
HepG2
266
tissue
ascending aorta
13
temporal lobe
13
angular gyrus
12
thoracic aorta
12
aorta
11
+ See 10 more…
primary cell
kidney epithelial cell
4
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
See all biosamples
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