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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
552
ChIP-seq
189
total RNA-seq
23
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
6
DNA accessibility
5
DNA methylation
Date released
4
August, 2017
4
November, 2018
2
June, 2019
1
July, 2019
Available data
6
bam
6
bigWig
5
bed bed3+
5
bed broadPeak
5
bed narrowPeak
5
bigBed broadPeak
5
bigBed narrowPeak
5
fastq
1
bed bedMethyl
1
bigBed bedMethyl
Organism
11
Homo sapiens
Biosample type
8
tissue
2
primary cell
1
cell line
Organ
81
kidney
66
epithelium
59
pancreas
38
heart
37
limb
34
musculature of body
32
brain
18
ureter
15
connective tissue
13
vasculature
11
blood vessel
11
liver
8
adipose tissue
4
artery
4
eye
3
spleen
2
nerve
2
vein
Project
11
AMP
Genome assembly (visualization)
6
GRCh38
5
hg19
Lab
11
AMP-T2D consortium
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
11 results
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DNase-seq
WGBS
tissue
liver
2
3
right lobe of liver
2
1
primary cell
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
1
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