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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
Assay category
102
DNA binding
Target of assay
338
transcription factor
108
control
103
histone modification
102
histone
82
recombinant protein
60
narrow histone mark
58
RNA binding protein
42
broad histone mark
23
chromatin remodeller
other context
2
other post-translational modification
Date released
32
August, 2017
27
May, 2020
17
December, 2017
15
November, 2017
6
August, 2021
5
October, 2019
Available data
82
bigWig
80
bed narrowPeak
79
bam
58
tagAlign
44
fastq
35
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
102
Homo sapiens
Biosample type
69
tissue
18
cell line
12
in vitro differentiated cells
3
primary cell
Organ
187
brain
151
pancreas
102
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
102
AMP
Genome assembly (visualization)
82
hg19
69
GRCh38
Lab
99
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
lab.title!
Kyle Gaulton, UCSD
target.investigated_as!
other context
BIOSAMPLE
ASSAY
102 results
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Clear Filters
ChIP-seq
tissue
liver
64
right lobe of liver
5
cell line
HepG2
18
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
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