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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
16
snATAC-seq
1
Hi-C
Assay category
34
DNA binding
16
DNA accessibility
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
397
May, 2021
341
May, 2020
314
October, 2019
311
August, 2021
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
81
December, 2017
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
35
December, 2018
30
January, 2019
26
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
35
fastq
34
bam
30
bed narrowPeak
30
bigBed narrowPeak
30
bigWig
Organism
51
Homo sapiens
Biosample type
28
cell line
15
tissue
8
primary cell
Organ
35
blood
35
bodily fluid
8
pancreas
7
spleen
1
liver
Project
35
AMP
16
T1D
Genome assembly (visualization)
30
GRCh38
30
hg19
Lab
35
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
lab.title!
Maike Sander, UCSD
organ_slims!
embryo
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ChIP-seq
snATAC-seq
Hi-C
cell line
GM12878
27
HepG2
1
tissue
spleen
7
islet of Langerhans
4
pancreas
4
primary cell
peripheral blood mononuclear cell
8
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