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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
14
ChIP-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
35
DNA accessibility
14
DNA binding
4
Transcription
Target of assay
11
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
35
February, 2023
10
October, 2019
2
August, 2021
2
February, 2020
2
February, 2021
2
May, 2019
Available data
35
bed narrowPeak
14
bam
4
tsv
2
tagAlign
Organism
53
Homo sapiens
Biosample type
46
tissue
5
primary cell
2
cell line
Organ
287
pancreas
225
kidney
213
epithelium
205
heart
166
liver
122
brain
95
connective tissue
89
bone element
71
blood vessel
71
vasculature
65
adipose tissue
48
artery
27
eye
26
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
140
GRCh38
hg19
Lab
53
AMP-T2D consortium
lab.title!
Maike Sander, UCSD
assembly!
hg19
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
35
2
1
tibial artery
5
1
pulmonary artery
2
primary cell
endothelial cell of umbilical vein
5
cell line
smooth muscle cell of the coronary artery
2
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