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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
189
total RNA-seq
3
small RNA-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
552
DNA binding
193
Transcription
29
DNA accessibility
7
DNA methylation
4
3D chromatin structure
1
DNA sequencing
Date released
143
May, 2020
20
May, 2022
10
August, 2021
7
July, 2019
5
December, 2019
5
January, 2019
1
February, 2020
1
February, 2021
1
March, 2020
1
October, 2019
Available data
172
tsv
162
bam
162
bigWig
5
fastq
1
csv
1
vcf
Organism
194
Homo sapiens
Biosample type
174
tissue
15
cell line
5
primary cell
Organ
481
connective tissue
479
pancreas
401
adipose tissue
201
epithelium
194
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
194
AMP
Genome assembly (visualization)
162
GRCh38
162
hg19
Lab
164
AMP-T2D consortium
20
Karen Mohlke, UNC
10
Bing Ren, UCSD
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
194 results
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total RNA-seq
small RNA-seq
single cell RNA-seq
whole genome sequencing assay
tissue
liver
167
1
1
right lobe of liver
3
2
cell line
HepG2
14
1
primary cell
hepatocyte
5
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