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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1336
ChIP-seq
1138
total RNA-seq
180
DNase-seq
90
ATAC-seq
18
WGBS
16
small RNA-seq
4
FAIRE-seq
Assay category
180
DNA accessibility
Date released
163
June, 2019
9
November, 2018
6
October, 2019
2
August, 2017
Available data
180
bam
180
bed narrowPeak
180
bigBed narrowPeak
180
bigWig
178
bed broadPeak
178
bigBed broadPeak
177
bed bed3+
11
fastq
Organism
180
Homo sapiens
Biosample type
177
tissue
primary cell
2
cell line
1
in vitro differentiated cells
Organ
69
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
8
pancreas
5
blood vessel
5
vasculature
4
artery
3
connective tissue
3
eye
3
liver
2
adipose tissue
2
nerve
1
epithelium
1
spleen
Project
180
AMP
Genome assembly (visualization)
180
GRCh38
164
hg19
Lab
180
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
lab.title!
Mark McCarthy, Oxford
biosample_type!
primary cell
BIOSAMPLE
ASSAY
180 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 40 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
1
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