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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ATAC-seq
2
snATAC-seq
Assay category
93
DNA accessibility
18
Transcription
Date released
163
June, 2019
93
February, 2023
82
August, 2021
39
May, 2022
26
November, 2019
26
October, 2019
21
February, 2021
21
May, 2021
11
May, 2023
10
April, 2020
10
November, 2018
8
January, 2021
8
July, 2019
8
October, 2017
6
August, 2017
4
March, 2020
3
January, 2018
2
March, 2019
1
August, 2022
Available data
65
bed narrowPeak
10
bed bed3
4
bed bed3+
3
bed bedgraph
3
bigWig
3
txt
Organism
93
Homo sapiens
Biosample type
81
tissue
12
in vitro differentiated cells
primary cell
Organ
35
artery
35
blood vessel
35
heart
35
vasculature
27
eye
13
pancreas
12
epithelium
10
connective tissue
4
bone element
4
skeleton
1
adipose tissue
1
brain
Project
80
AMP
13
T1D
Genome assembly (visualization)
45
hg19
35
GRCh38
Lab
77
AMP-T2D consortium
13
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
3
inconsistent ontology term
lab.title!
Mark McCarthy, Oxford
biosample_type!
primary cell
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ATAC-seq
snATAC-seq
tissue
coronary artery
35
retina
15
islet of Langerhans
11
2
pigmented layer of retina
12
acetabular part of hip bone
1
+ See 5 more…
in vitro differentiated cells
chondrocyte
5
immature adipocyte
2
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
embryonic stem cell
1
+ See 2 more…
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