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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
2
ATAC-seq
2
pCHi-C
Assay category
10
3D chromatin structure
2
DNA accessibility
Date released
406
November, 2017
322
August, 2017
298
October, 2019
218
June, 2019
196
August, 2021
152
May, 2020
124
May, 2021
120
May, 2019
117
February, 2021
94
December, 2017
90
February, 2023
88
November, 2018
80
April, 2019
74
October, 2018
66
May, 2022
47
September, 2018
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
15
May, 2023
14
March, 2020
12
November, 2020
11
September, 2017
8
January, 2018
4
July, 2018
3
March, 2019
1
August, 2018
1
August, 2022
1
December, 2019
1
October, 2022
Available data
tsv
15
bigWig
12
bedpe bed3+
11
bam
10
hic
2
ibed
Organism
14
Homo sapiens
Biosample type
8
tissue
4
in vitro differentiated cells
1
cell line
1
primary cell
Organ
3
pancreas
2
blood vessel
2
epithelium
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
14
AMP
5
T1D
Genome assembly (visualization)
14
hg19
Lab
14
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
lab.title!
Mark McCarthy, Oxford
files.file_type!
tsv
BIOSAMPLE
ASSAY
14 results
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Clear Filters
Hi-C
ATAC-seq
pCHi-C
tissue
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
islet of Langerhans
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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