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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
STARR-seq
4
ChIP-seq
1
Hi-C
1
whole genome sequencing assay
Assay category
4
DNA binding
1
3D chromatin structure
1
DNA sequencing
Target of assay
4
control
Date released
11
August, 2021
Available data
tsv
1
bedpe bed3+
1
vcf
Organism
11
Homo sapiens
Biosample type
10
cell line
1
tissue
Organ
7
liver
2
kidney
1
pancreas
Project
11
AMP
Genome assembly (visualization)
hg19
1
GRCh38
Lab
805
AMP-T2D consortium
315
Klaus Kaestner, Upenn
141
Katalin Susztak, Upenn
105
Kyle Gaulton, UCSD
47
KPMP
40
Patrick T. Ellinor, Broad
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
11
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
1
ITG
1
Maike Sander, UCSD
Mark McCarthy, Oxford
Audit category:
1
inconsistent ontology term
lab.title!
Mark McCarthy, Oxford
files.file_type!
tsv
assembly!
hg19
BIOSAMPLE
ASSAY
11 results
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STARR-seq
ChIP-seq
Hi-C
whole genome sequencing assay
cell line
HepG2
2
4
1
HEK293T
2
Synthesized DNA
1
tissue
islet of Langerhans
1
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