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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
132
ChIP-seq
48
ATAC-seq
32
DNase-seq
Assay category
132
DNA binding
80
DNA accessibility
Target of assay
115
histone
115
histone modification
71
broad histone mark
44
narrow histone mark
17
transcription factor
11
RNA binding protein
Date released
47
April, 2019
40
May, 2024
35
February, 2023
33
June, 2019
26
October, 2019
15
May, 2019
12
February, 2021
4
July, 2019
Available data
245
bigWig
237
bam
212
bed narrowPeak
171
tsv
114
bigBed narrowPeak
32
bed bed3+
32
bed broadPeak
32
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
212
Homo sapiens
Biosample type
194
tissue
12
cell line
6
primary cell
Organ
441
liver
214
pancreas
203
brain
191
heart
183
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
212
AMP
Genome assembly (visualization)
211
GRCh38
134
hg19
Lab
172
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
212 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
3
36
2
left cardiac atrium
40
1
heart left ventricle
29
2
3
heart
12
18
tibial artery
18
1
2
+ See 3 more…
cell line
smooth muscle cell of the coronary artery
4
8
primary cell
cardiac fibroblast
3
3
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