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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
Assay category
65
DNA binding
Target of assay
37
transcription factor
14
histone
14
histone modification
12
control
9
narrow histone mark
5
broad histone mark
2
RNA binding protein
2
chromatin remodeller
Date released
712
February, 2021
399
May, 2021
357
August, 2017
307
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
3
March, 2019
1
August, 2022
Available data
65
bam
65
fastq
52
bed narrowPeak
52
bigWig
30
bigBed narrowPeak
15
bed bed3+
Organism
65
Homo sapiens
Biosample type
28
in vitro differentiated cells
27
cell line
7
tissue
3
stem cell
Organ
liver
27
blood
27
bodily fluid
19
epithelium
13
embryo
7
spleen
Project
65
AMP
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
65
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
1
inconsistent control
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
lab.title!
Mark McCarthy, Oxford
organ_slims!
liver
BIOSAMPLE
ASSAY
65 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
Hepatic endoderm
4
cell line
GM12878
27
tissue
spleen
7
stem cell
hESC
3
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