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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
Assay category
17
DNA binding
Target of assay
272
transcription factor
88
histone
88
histone modification
75
control
66
recombinant protein
50
broad histone mark
39
RNA binding protein
38
narrow histone mark
17
chromatin remodeller
2
other context
2
other post-translational modification
Date released
15
November, 2017
7
November, 2018
6
January, 2019
3
August, 2017
3
December, 2017
2
December, 2018
Available data
17
bam
17
bed narrowPeak
17
bigBed narrowPeak
17
bigWig
17
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
17
Homo sapiens
Biosample type
17
cell line
Organ
15
liver
2
blood
2
bodily fluid
Project
17
AMP
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
4
missing controlled_by
Audit category:
6
inconsistent control read length
4
inconsistent control run_type
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
cell line
HepG2
15
GM12878
2
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