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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
185
DNase-seq
151
ChIP-seq
Assay category
185
DNA accessibility
151
DNA binding
Target of assay
111
histone
111
histone modification
66
broad histone mark
45
narrow histone mark
31
control
9
RNA binding protein
9
transcription factor
Date released
712
February, 2021
399
May, 2021
357
August, 2017
307
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
3
March, 2019
1
August, 2022
Available data
336
bam
305
bed narrowPeak
305
bigBed narrowPeak
305
bigWig
185
bed bed3+
185
bed broadPeak
185
bigBed broadPeak
Organism
336
Homo sapiens
Biosample type
278
tissue
58
primary cell
Organ
86
kidney
58
brain
57
vasculature
56
heart
55
blood vessel
50
musculature of body
39
limb
25
epithelium
18
connective tissue
18
ureter
7
artery
7
eye
6
pancreas
liver
1
adipose tissue
Project
336
AMP
Genome assembly (visualization)
304
GRCh38
282
hg19
Lab
336
AMP-T2D consortium
Audit category:
29
inconsistent ontology term
lab.title!
Mark McCarthy, Oxford
organ_slims!
liver
BIOSAMPLE
ASSAY
336 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
muscle of leg
13
7
heart
18
ascending aorta
1
16
muscle of arm
17
thoracic aorta
16
+ See 40 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
kidney epithelial cell
1
5
cardiac muscle cell
1
3
+ See 15 more…
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