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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
RRBS
5
ChIP-seq
5
total RNA-seq
2
Hi-C
Assay category
6
DNA methylation
5
DNA binding
5
Transcription
2
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
RNA binding protein
1
control
1
narrow histone mark
1
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
11
bigWig
10
bam
6
bed bedMethyl
6
bigBed bedMethyl
5
tsv
4
bed narrowPeak
4
bigBed narrowPeak
2
bed bed3+
2
hdf5
Organism
18
Homo sapiens
Biosample type
18
primary cell
Organ
62
vasculature
61
blood vessel
46
brain
46
heart
18
connective tissue
18
epithelium
17
musculature of body
16
kidney
12
adipose tissue
12
limb
10
liver
8
artery
8
pancreas
2
pericardium
1
eye
Project
18
AMP
Genome assembly (visualization)
17
hg19
9
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
18 results
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Clear Filters
RRBS
ChIP-seq
total RNA-seq
Hi-C
primary cell
kidney epithelial cell
1
5
1
epithelial cell of proximal tubule
1
1
renal cortical epithelial cell
1
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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