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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
total RNA-seq
2
pCHi-C
2
single cell RNA-seq
Assay category
124
Transcription
Date released
78
May, 2021
18
February, 2021
15
February, 2018
7
August, 2021
4
March, 2020
2
December, 2019
2
October, 2019
Available data
232
bam
202
bigWig
126
tsv
87
bed narrowPeak
86
fastq
26
tagAlign
14
bigBed narrowPeak
12
bed bed3+
6
bedpe bed3+
4
hic
3
bed bedgraph
3
txt
2
ibed
Organism
126
Homo sapiens
Biosample type
619
tissue
255
primary cell
126
in vitro differentiated cells
119
cell line
3
stem cell
Organ
6
embryo
connective tissue
2
epithelium
1
heart
Project
126
AMP
Genome assembly (visualization)
122
GRCh38
122
hg19
Lab
126
AMP-T2D consortium
Audit category:
90
inconsistent ontology term
2
audit script error
lab.title!
Mark McCarthy, Oxford
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
126 results
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total RNA-seq
pCHi-C
single cell RNA-seq
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
induced pluripotent stem cell
9
neural progenitor cell
7
cardiomyocytes (cardiac muscle cell)
3
1
2
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