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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
Assay category
37
DNA binding
Target of assay
243
transcription factor
87
histone
87
histone modification
70
control
66
recombinant protein
50
broad histone mark
37
narrow histone mark
36
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
131
October, 2019
88
August, 2017
64
May, 2021
37
November, 2017
27
May, 2020
23
April, 2019
20
May, 2019
16
December, 2017
15
May, 2024
15
September, 2018
11
August, 2021
11
June, 2019
11
October, 2018
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
2
October, 2017
Available data
29
bigWig
28
bam
28
bed narrowPeak
27
bigBed narrowPeak
26
tagAlign
12
bed broadPeak
9
fastq
8
bigBed broadPeak
Organism
37
Homo sapiens
Biosample type
28
tissue
7
cell line
2
primary cell
Organ
31
brain
7
liver
2
epithelium
2
vasculature
blood vessel
Project
37
AMP
Genome assembly (visualization)
27
GRCh38
13
hg19
Lab
37
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
lab.title!
Mark McCarthy, Oxford
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
37 results
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Clear Filters
ChIP-seq
tissue
layer of hippocampus
7
caudate nucleus
5
cingulate gyrus
5
middle frontal area 46
5
substantia nigra
5
+ See 1 more…
cell line
HepG2
7
primary cell
astrocyte of the cerebellum
1
choroid plexus epithelial cell
1
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