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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
853
ChIP-seq
237
total RNA-seq
127
single cell RNA-seq
61
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
127
Transcription
Date released
44
April, 2018
42
July, 2018
22
September, 2020
12
February, 2021
3
August, 2018
2
June, 2018
1
November, 2018
1
September, 2018
Available data
202
tsv
127
fastq
99
bam
99
bigWig
52
zippedFastqFolder
13
txt
8
csv
Organism
127
Homo sapiens
Biosample type
121
primary cell
6
tissue
Organ
70
pancreas
65
epithelium
3
connective tissue
Project
93
AMP
34
HPAP
Genome assembly (visualization)
91
GRCh38
91
hg19
Lab
93
AMP-T2D consortium
34
Klaus Kaestner, Upenn
Audit category:
inconsistent ontology term
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
127 results
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single cell RNA-seq
primary cell
Langerhans cell
34
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic cell
9
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tissue
islet of Langerhans
6
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