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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
3
Hi-C
1
FAIRE-seq
Assay category
3
3D chromatin structure
3
DNA binding
1
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
3
November, 2017
3
October, 2022
1
October, 2019
Available data
1485
bam
1397
bigWig
981
fastq
833
bed narrowPeak
524
tsv
481
bigBed narrowPeak
160
tagAlign
153
zippedFastqFolder
109
bed broadPeak
109
bigBed broadPeak
68
bed bed3+
13
bedpe bed3+
12
hic
11
bed bedMethyl
11
bigBed bedMethyl
7
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
csv
2
ibed
1
vcf
Organism
7
Homo sapiens
Biosample type
4
primary cell
3
cell line
Organ
4
epithelium
3
liver
3
pancreas
1
blood vessel
1
vasculature
1
vein
Project
4
AMP
3
HPAP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
biosample_type!
tissue
BIOSAMPLE
ASSAY
7 results
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Clear Filters
ChIP-seq
Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
HepG2
3
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