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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
Assay category
78
DNA binding
Target of assay
42
transcription factor
20
histone
20
histone modification
16
control
10
broad histone mark
10
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
713
February, 2021
397
May, 2021
396
November, 2017
353
August, 2017
341
May, 2020
314
August, 2021
306
October, 2019
201
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
104
July, 2019
80
April, 2019
78
December, 2017
76
November, 2018
76
October, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
41
September, 2018
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
15
May, 2023
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
November, 2020
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
93
bam
93
fastq
72
bed narrowPeak
72
bigWig
50
bigBed narrowPeak
bed bed3+
Organism
78
Homo sapiens
Biosample type
48
tissue
30
in vitro differentiated cells
Organ
63
liver
19
epithelium
9
embryo
Project
78
AMP
Genome assembly (visualization)
62
GRCh38
62
hg19
Lab
78
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
5
inconsistent control read length
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
files.file_type!
bed bed3+
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
5
Hepatic endoderm
4
Posterior foregut
2
definitive endodermal cell
2
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