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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
167
total RNA-seq
142
ChIP-seq
20
ATAC-seq
3
WGBS
1
Hi-C
1
RRBS
1
pCHi-C
1
single cell RNA-seq
1
small RNA-seq
Assay category
142
DNA binding
Target of assay
65
histone modification
64
histone
42
control
42
narrow histone mark
35
transcription factor
22
broad histone mark
2
chromatin remodeller
1
RNA binding protein
Date released
50
May, 2020
45
August, 2017
38
December, 2017
5
October, 2019
4
November, 2018
Available data
122
bam
82
bed narrowPeak
82
bigWig
70
tagAlign
67
fastq
38
bigBed narrowPeak
bed bed3+
Organism
142
Homo sapiens
Biosample type
142
tissue
Organ
142
liver
Project
142
AMP
Genome assembly (visualization)
80
hg19
72
GRCh38
Lab
142
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
1
inconsistent control read length
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
142 results
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ChIP-seq
tissue
liver
142
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