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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1839
ChIP-seq
1448
total RNA-seq
514
ATAC-seq
349
single cell RNA-seq
212
DNase-seq
83
snATAC-seq
75
WGBS
57
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
2
December, 2019
1
August, 2021
Available data
txt
2
tsv
Organism
2
Homo sapiens
Biosample type
3
tissue
Organ
2
kidney
1
adipose tissue
1
connective tissue
1
epithelium
Project
3
AMP
Lab
3
AMP-T2D consortium
Audit category:
2
audit script error
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
month_released!
September, 2018
files.file_type!
txt
BIOSAMPLE
ASSAY
3 results
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RNA microarray
tissue
kidney interstitium
1
renal glomerulus
1
subcutaneous adipose tissue
1
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