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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
ATAC-seq
6
total RNA-seq
4
DNase-seq
Assay category
59
DNA binding
6
Transcription
4
DNA accessibility
Target of assay
43
histone
43
histone modification
30
broad histone mark
16
control
13
narrow histone mark
Date released
67
October, 2019
2
February, 2020
Available data
66
bam
50
bigWig
46
bed narrowPeak
46
bigBed narrowPeak
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
69
Homo sapiens
Biosample type
69
tissue
Organ
784
pancreas
768
liver
659
connective tissue
485
adipose tissue
415
epithelium
346
heart
282
brain
279
kidney
190
vasculature
184
blood vessel
147
bone element
114
limb
96
artery
musculature of body
68
blood
68
bodily fluid
42
nerve
37
embryo
33
eye
24
spleen
22
vein
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
69
AMP
Genome assembly (visualization)
50
GRCh38
50
hg19
Lab
69
AMP-T2D consortium
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
organ_slims!
musculature of body
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
total RNA-seq
DNase-seq
tissue
tibial nerve
35
5
2
tibial artery
23
1
2
islet of Langerhans
1
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