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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
4
DNase-seq
1
FAIRE-seq
Assay category
71
DNA binding
5
DNA accessibility
Target of assay
66
histone
66
histone modification
41
broad histone mark
25
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
39
May, 2019
33
October, 2019
June, 2019
4
November, 2017
Available data
178
bam
148
bigWig
126
bed narrowPeak
76
bigBed narrowPeak
68
tsv
10
bed broadPeak
10
bigBed broadPeak
6
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
76
Homo sapiens
Biosample type
59
tissue
17
primary cell
Organ
356
liver
97
brain
87
pancreas
76
vasculature
74
blood vessel
61
heart
58
epithelium
54
blood
54
bodily fluid
52
limb
26
nerve
24
kidney
23
artery
13
connective tissue
13
spleen
13
vein
9
adipose tissue
6
musculature of body
Project
76
AMP
Genome assembly (visualization)
76
hg19
75
GRCh38
Lab
76
AMP-T2D consortium
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
month_released!
June, 2019
BIOSAMPLE
ASSAY
76 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
13
thoracic aorta
12
aorta
11
coronary artery
3
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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