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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
2
ChIP-seq
Assay category
9
DNA accessibility
2
DNA binding
Target of assay
2
broad histone mark
2
histone
2
histone modification
Date released
6
October, 2019
5
June, 2019
Available data
177
bam
146
bigWig
127
bed narrowPeak
77
bigBed narrowPeak
68
tsv
11
bed broadPeak
11
bigBed broadPeak
10
bed bed3+
6
tagAlign
3
hic
2
bedpe bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
tar
Organism
11
Homo sapiens
Biosample type
6
primary cell
5
tissue
Organ
78
kidney
63
liver
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
11
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
organ_slims!
brain
BIOSAMPLE
ASSAY
11 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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