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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
2
Hi-C
1
pCHi-C
Assay category
5
DNA binding
2
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
broad histone mark
2
control
1
narrow histone mark
Date released
6
October, 2019
2
March, 2020
Available data
20
bam
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tar
1
tsv
Organism
8
Homo sapiens
Biosample type
7
primary cell
1
tissue
Organ
313
pancreas
223
kidney
217
epithelium
169
heart
169
liver
114
connective tissue
101
bone element
81
vasculature
80
blood vessel
66
adipose tissue
64
brain
56
artery
55
eye
31
limb
28
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
8
AMP
Genome assembly (visualization)
2
hg19
Lab
8
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
files.file_type!
bigWig
BIOSAMPLE
ASSAY
8 results
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Clear Filters
ChIP-seq
Hi-C
pCHi-C
primary cell
endothelial cell of umbilical vein
5
2
tissue
bladder (urinary bladder)
1
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