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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1390
ChIP-seq
1284
total RNA-seq
209
DNase-seq
135
ATAC-seq
100
single cell RNA-seq
18
small RNA-seq
17
WGBS
5
FAIRE-seq
5
GRO-seq
5
Hi-C
0
RNA microarray
Assay category
100
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
3
August, 2018
3
July, 2019
3
June, 2018
Available data
207
tsv
128
fastq
100
bam
100
bigWig
97
txt
52
zippedFastqFolder
8
csv
Organism
100
Homo sapiens
Biosample type
100
primary cell
Organ
74
pancreas
70
epithelium
4
connective tissue
3
brain
Project
100
AMP
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
100
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
lab.title!
Stephen Parker, UMich
BIOSAMPLE
ASSAY
100 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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