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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
DNA binding
10
DNA accessibility
7
DNA methylation
1
Transcription
Date released
681
February, 2021
291
May, 2020
255
August, 2021
200
May, 2022
189
February, 2023
187
June, 2019
168
July, 2018
145
May, 2021
114
August, 2017
108
July, 2019
64
October, 2019
59
September, 2020
53
March, 2020
49
April, 2018
47
September, 2023
43
November, 2019
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
May, 2023
8
December, 2019
7
August, 2020
7
October, 2017
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
18
fastq
17
bam
17
bigWig
10
bed narrowPeak
10
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
18
Homo sapiens
Biosample type
16
tissue
1
cell line
1
primary cell
Organ
7
pancreas
4
liver
3
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
18
AMP
Genome assembly (visualization)
16
GRCh38
10
hg19
Lab
18
AMP-T2D consortium
lab.title!
Stephen Parker, UMich
biosample_type!
in vitro differentiated cells
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
18 results
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Clear Filters
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
tissue
body of pancreas
2
2
pancreas
2
1
spleen
1
2
brain
2
liver
2
+ See 2 more…
cell line
HepG2
1
primary cell
pancreatic cell
1
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