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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ATAC-seq
38
ChIP-seq
15
total RNA-seq
Assay category
76
DNA accessibility
38
DNA binding
15
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
8
control
1
RNA binding protein
Date released
572
February, 2021
393
November, 2017
307
May, 2021
302
August, 2017
283
May, 2020
250
October, 2019
218
June, 2019
164
July, 2018
129
August, 2021
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
80
April, 2019
76
October, 2018
72
September, 2018
65
February, 2023
59
November, 2019
49
April, 2018
44
May, 2022
40
May, 2024
39
February, 2018
34
December, 2018
30
January, 2019
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
123
tsv
106
bed narrowPeak
64
xls
57
txt
49
bam
47
bigWig
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
129
Homo sapiens
Biosample type
64
tissue
39
in vitro differentiated cells
22
cell line
4
primary cell
Organ
64
kidney
18
liver
8
embryo
4
epithelium
2
connective tissue
Project
129
AMP
Genome assembly (visualization)
105
GRCh38
56
hg19
Lab
64
Katalin Susztak, Upenn
49
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
lab.title!
Stephen Parker, UMich
BIOSAMPLE
ASSAY
129 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
tissue
kidney
64
in vitro differentiated cells
neural progenitor cell
10
20
7
adipocyte
1
osteoblast
1
cell line
HepG2
14
H1-hESC
8
primary cell
hepatocyte
4
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