Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
7
ChIP-seq
2
DNase-seq
1
ATAC-seq
Assay category
54
Transcription
7
DNA binding
3
DNA accessibility
Target of assay
5
transcription factor
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
Date released
56
February, 2021
October, 2019
3
July, 2019
3
May, 2019
2
June, 2019
Available data
76
bam
64
bigWig
58
tsv
53
bed narrowPeak
6
tagAlign
5
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
64
Homo sapiens
Biosample type
56
cell line
6
tissue
2
primary cell
Organ
616
liver
614
pancreas
567
connective tissue
424
adipose tissue
276
epithelium
217
heart
146
brain
119
vasculature
114
blood vessel
109
kidney
68
musculature of body
64
artery
58
bone element
55
blood
55
bodily fluid
39
limb
29
embryo
18
ureter
16
spleen
6
eye
1
pericardium
Project
64
AMP
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
64
AMP-T2D consortium
lab.title!
Stephen Parker, UMich
month_released!
October, 2019
BIOSAMPLE
ASSAY
64 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
4
tissue
coronary artery
3
2
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download