Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
44
ATAC-seq
9
ChIP-seq
2
DNase-seq
2
single cell RNA-seq
Assay category
58
Transcription
46
DNA accessibility
9
DNA binding
Target of assay
5
transcription factor
4
control
2
histone
histone modification
2
narrow histone mark
1
RNA binding protein
Date released
66
February, 2021
35
February, 2023
October, 2019
3
July, 2019
3
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
74
bam
62
bigWig
58
tsv
51
bed narrowPeak
6
tagAlign
3
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
113
Homo sapiens
Biosample type
66
cell line
45
tissue
2
primary cell
Organ
783
pancreas
686
liver
603
connective tissue
458
adipose tissue
417
epithelium
302
kidney
293
heart
159
bone element
151
vasculature
146
blood vessel
113
artery
90
brain
68
blood
68
bodily fluid
63
musculature of body
47
limb
39
eye
25
embryo
20
lung
19
spleen
18
ureter
16
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
113
AMP
Genome assembly (visualization)
105
GRCh38
70
hg19
Lab
113
AMP-T2D consortium
lab.title!
Stephen Parker, UMich
month_released!
October, 2019
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
113 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
6
tissue
coronary artery
1
36
3
2
pulmonary artery
2
tibial artery
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download